Well now - upgraded everything, now running CentOS 5.4 with 2.6.18-164.el5PAE #1 kernel and mysql server 5.1.40.
But unfortunately still no success. It still looks like there is only one of the 8 CPUs working(which can be explained by a single connection) - but that one spends over 95% waiting on I/O..
top
===
top - 10:53:11 up 47 min, 3 users, load average: 1.03, 1.10, 1.00
Tasks: 159 total, 1 running, 158 sleeping, 0 stopped, 0 zombie
Cpu0 : 0.7%us, 1.0%sy, 0.0%ni, 0.3%id, 98.0%wa, 0.0%hi, 0.0%si, 0.0%st
Cpu1 : 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st
Cpu2 : 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st
Cpu3 : 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st
Cpu4 : 0.3%us, 0.3%sy, 0.0%ni, 99.3%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st
Cpu5 : 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st
Cpu6 : 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st
Cpu7 : 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st
Mem: 4148268k total, 629552k used, 3518716k free, 51320k buffers
Swap: 2031608k total, 0k used, 2031608k free, 396120k cached
vmstat
======
procs -----------memory---------- ---swap-- -----io---- --system-- -----cpu------
r b swpd free buff cache si so bi bo in cs us sy id wa st
0 1 0 637884 230912 3038432 0 0 0 757 1404 933 0 0 87 12 0
0 1 0 637636 230940 3038728 0 0 0 779 1389 952 0 0 88 12 0
0 1 0 637264 230964 3038920 0 0 0 690 1372 914 0 0 87 12 0
0 0 0 636520 230980 3039296 0 0 0 844 1378 926 0 0 87 12 0
0 1 0 636396 230996 3039512 0 0 0 710 1388 949 0 0 87 12 0
0 1 0 635900 231008 3039796 0 0 0 691 1382 945 0 0 87 12 0
0 1 0 635528 231040 3039992 0 0 0 899 1400 974 0 0 87 12 0
0 1 0 635024 231048 3040292 0 0 0 862 1423 996 0 0 87 12 0
0 1 0 634908 231064 3040500 0 0 0 823 1393 951 0 0 87 12 0
0 1 0 634784 231088 3040804 0 0 0 712 1383 947 0 0 87 12 0
0 1 0 634660 231108 3041004 0 0 0 899 1393 950 0 0 87 12 0
0 1 0 634288 231120 3041300 0 0 0 749 1406 1001 0 0 87 12 0
0 1 0 634040 231128 3041504 0 0 0 847 1396 964 0 0 87 12 0
0 1 0 633544 231144 3041820 0 0 0 708 1387 958 0 0 88 12 0
iostat
======
Device: rrqm/s wrqm/s r/s w/s rsec/s wsec/s avgrq-sz avgqu-sz await svctm %util
cciss/c0d0 0,00 20,00 0,00 154,80 0,00 1398,40 9,03 1,00 6,48 6,45 99,82
cciss/c0d0p1
0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00
cciss/c0d0p2
0,00 20,00 0,00 154,80 0,00 1398,40 9,03 1,00 6,48 6,45 99,82
dm-0 0,00 0,00 0,00 161,80 0,00 1294,40 8,00 1,05 6,47 6,07 98,26
dm-1 0,00 0,00 0,00 12,80 0,00 102,40 8,00 0,17 13,31 1,19 1,52
dm-2 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00
dm-3 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00
dm-4 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00
dm-5 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00 0,00
Still grateful for ideas..